https://miyeonyeon.r-universe.devRecent package updates in miyeonyeonR-universehttps://github.com/miyeonyeon.pnghttps://miyeonyeon.r-universe.devTue, 28 Apr 2026 13:06:41 GMTmyeon@uthsc.edu (Miyeon Yeon)RNAshapeQC provides coverage-shape-based quality control (QC) metrics for mRNA-seq and total RNA-seq data. It supports per-gene pileup construction from BAM files as well as toy datasets for quick-start examples. The package implements protocol-specific metrics, including decay rate (DR), degradation score (DS), mean coverage depth (MCD), window coefficient of variation (wCV), area under the curve (AUC), and shape-based sample-level indices. RNAshapeQC also includes HPC-friendly functions for per-gene batch processing and cross-study pileup generation. This package enables interpretable, protocol-specific QC assessments for diverse RNA-seq workflows.https://github.com/r-universe/bioc/actions/runs/38871908650Tue, 28 Apr 2026 13:06:41 GMTRNAshapeQC1.1.0successhttps://bioc.r-universe.devhttps://github.com/bioc/RNAshapeQCRNAshapeQC_intro.RmdRNAshapeQC_intro.htmlRNAshapeQC: Quick Start Tutorial2025-12-01 09:50:132026-03-21 16:13:24